Wada Fine Arts
- Small art space hosting exhibitions in Tsukiji, Chuo-ku. Site provides information on artists and exhibits, news, and Japanese-language blog.
- http://web.mac.com/wadafinearts/

Setagaya Art Museum
- Hosts exhibitions ranging from prehistoric to contemporary art. Also highlights works by artists from Tokyo's Setagaya area. Located in Kinuta-koen, Setagaya-ku.
- http://www.setagayaartmuseum.or.jp/index_e.html

Tokyo Metropolitan Museum of Photography
- Includes outline, overview, galleries, workshops, and school programs. Located in Meguro-ku, Tokyo.
- http://www.syabi.com/index_eng.shtml

Laforet Art and Planning Network
- A variety of exhibits in contemporary art spaces in Jingumae (Shibuya-ku), Roppongi, and Harajuku. Site mostly in Japanese with some English-language navigation.
- http://www.lapnet.jp/

Yamatane Museum of Art
- Features 7-8 exhibitions annually, mainly focusing on modern Japanese paintings created after the Meiji era. The Museum also has collections of oil paintings, Ukiyoe, Japanese Calligraphy and Japanese tea ceremony sets. Located in Sanbancho, Chiyoda-ku.
- http://www.yamatane-museum.or.jp/

Paul Smith Art Space
- Small gallery featuring art by Paul Smith. Located in Jingumae, Shibuya-ku.
- http://www.paulsmith.co.jp/

Pola Museum Annex
- Contemporary art museum in Ginza, Chuo-ku. Facilities include two cafes. Site mostly in Japanese with some English-language navigation.
- http://www.pola-ma.jp/

Marunouchi Gallery
- Small gallery in Marunouchi, Chiyoda-ku.
- http://www.marunouchigallery.com/

Gallery Minmin
- Small gallery in Roppongi exhibiting mostly Western art. Japanese/English bilingual website.
- http://www.galleryminmin.com/

The National Art Center, Tokyo
- Guide to the facilities at NACT in Nogizaka.
- http://www.nact.jp/english/index.html

Idemitsu Museum of Arts
- Displays the collection of Sazo Idemitsu. Mainly Japanese art with some Chinese, Korean, and Western pieces. Located in Marunouchi, Chiyoda-ku.
- http://www.idemitsu.co.jp/museum/english/

Gallery Koyanagi
- Small gallery exhibiting photography and prints from Japanese and world artists. Located in Ginza, Chuo-ku.
- http://www.gallerykoyanagi.com/

Bridgestone Museum of Fine Art
- Houses the Bridgestone Tyre Company's collection, centering on French impressionist art. Also exhibits works by Japanese impressionists. Located in Kobayashi, Chuo-ku.
- http://www.bridgestone-museum.gr.jp/en/

Suntory Museum Of Art
- Located on the 11th Floor of Suntory Hall in Akasaka. Holds over 2,000 pieces of traditional artifacts and also includes library and tearoom.
- http://www.suntory.com/culture-sports/sma/

Paper Museum
- Dedicated to preserving the traditions and ways of making the handmade Japanese paper and to training successors to continue the craft. Includes collection details, hours, admission fees, events, and directions. Located in Kita-Ku, Tokyo.
- http://www.papermuseum.jp/english.htm

Edo Tokyo Museum
- Aims to offer an environment in which the atmosphere of Edo (old Tokyo) can be experienced. With guide to hours, access, exhibitions, and floor guide.
- http://www.edo-tokyo-museum.or.jp/english/index.html

Katsushika City Museum
- Features local history and astronomy. Includes hours, calendar of events, links, photos, admission fees and directions. Located in Katsushika-ku, Tokyo.
- http://www.city.katsushika.lg.jp/museum/index-e.html

Museum of Contemporary Art Tokyo
- Features international and Japanese contemporary art created since 1945. Also houses a contemporary art library.
- http://www.mot-art-museum.jp/english/

Gallery 360
- Provides exhibition and event schedule, news, and artist biographies. Located in Minamiaoyama.
- http://www.360.co.jp/

Nishimura Gallery
- Located in Chuo-ku, Tokyo. With guide to current exhibitions, artists, access, catalogs and books.
- http://www.nishimura-gallery.com/

Hara Museum of Contemporary Art
- Tokyo museum site features special exhibits, artists' biographies, and articles. Collection, schedule, and membership details. Online store as well.
- http://www.haramuseum.or.jp/

Mizuma Art Gallery
- With gallery information, current exhibitions, artists, and archive. Located near Aoyama Gakuin University.
- http://mizuma-art.co.jp/

Mitsuo Aida Museum
- Dedicated to the 20th century author and poet. With admissions and parking information, tickets, and hours open. Located in Ginza.
- http://www.mitsuo.co.jp/

University Art Museum - Tokyo National University of Fine Arts and Music
- Holds about 28000 pieces based on Japanese modern art including art works of former teachers and students. Site includes information on the museum's schedule, admissions, major exhibitions, and sculptures.
- http://www.geidai.ac.jp/museum/news/news_en.htm

Ota Memorial Museum of Art
- Displays ukiyo-e prints and paintings from Ota Seizo's collection of over 12,000 pieces. Exhibition schedule, admission fees and hours, and map and directions. [English/Japanese]
- http://www.ukiyoe-ota-muse.jp/english.html

Nihon Mingeikan Art Museum
- A Japan folk crafts museum, showing traditional arts such as pottery from Kyushu.
- http://www.mingeikan.or.jp/Pages/entrance-e.html

Tokyo University Digital Museum
- Engaged in the long-term preservation of collected research materials through digital archiving, with over 26,000 objects and 170GB of data stored.
- http://www.um.u-tokyo.ac.jp/

Meguro Museum of Art, Tokyo
- Offers an international collection of modern and contemporary art.
- http://www.dnp.co.jp/museum/meguro/meguro-e.html

Seiji Togo Memorial Sompo Japan Museum of Art
- The museum's core collection is comprised of the works of Seiji Togo, a noted Japanese artist. Togo donated some 200 of his own works to the museum, along with his collection of over 250 works by other Japanese and foreign artists.
- http://www.sompo-japan.co.jp/museum/

Tokyo National Museum
- Gives museum guide, history, current exhibits and events. Located in Ueno, Tokyo.
- http://www.tnm.go.jp/

National Science Museum
- Includes information on events, exhibits, education, research, databases, and museum shop. Located in Ueno Park, Tokyo.
- http://www.kahaku.go.jp/

Tokyo Station Gallery
- With listing of current exhibits, hours and admissions, local cultural activities and research, and online galleries.
- http://www.ejrcf.or.jp/gallery/

Promo-Arte
- Gallery in Japan specializing in Latin American art and to offer exclusive representation for its artists. Located in Omotesando. Specializing in Latin American art. Includes upcoming exhibits and artist profiles. [English/Japanese]
- http://www.promo-arte.com/

Nezu Institute of Fine Arts
- Includes paintings, calligraphy, sculpture, ceramics, textiles, metal, wood, and Buddhist art. Located in Tokyo.
- http://www.nezu-muse.or.jp/index_e.html

The National Museum of Western Art
- Exhibits European paintings, sculptures, drawings, and prints from the 14th through the 20th centuries. Site features illustrated samples from the collections. Located ing Taito-ku.
- http://www.nmwa.go.jp/

The National Museum of Modern Art, Tokyo
- Japan's first national art museum with works of art, crafts, film, and related materials; plus surveys and research, and public exhibitions and screenings.
- http://www.momat.go.jp/

The Gotoh Museum
- Premodern art from Japan, China and Korea. Located in Tokyo.
- http://www.dnp.co.jp/museum/gotoh/gotoh-e.html